All datasets used in HMMpTM are available for download
here
For publication of results, please cite:
Tsaousis G.N., Bagos P.G., Hamodrakas S.J.
HMMpTM: Improving transmembrane protein topology prediction using phosphorylation and glycosylation site prediction.
Biochim Biophys Acta, (2013) 1844(2): 316-322
doi: 10.1016/j.bbapap.2013.11.001